usegalaxy.org support

Topic	Replies	Views	Activity
JBrowse hasn't worked for 3 days!	4	9	March 4, 2026
Using GeMoMa in Galaxy: Genome Annotation in Galaxy gtn-tutorial , usinggalaxy , genome-annotation	3	24	March 2, 2026
Please help me fix the Snippy error tool-help , snippy	1	19	March 1, 2026
Bcftools convert to vcf skipping all rows bcftools	3	24	February 27, 2026
GROMACS Solvation Step High Throughput Molecular Dynamics and AnalysisTutorial gromacs	5	39	February 25, 2026
featureCounts not giving single count files from multiple BAm files tool-help , featurecounts	1	14	February 25, 2026
Need help using the qiime2 tools import function qiime2 , qiime2_core__tools__import	2	43	February 25, 2026
Unable to import my files as .qza qiime2_core__tools__import	4	124	February 25, 2026
the metadata and error of qiime2 import qiime2 , qiime2_core__tools__import	4	112	February 25, 2026
BUSCO + miniprot fails with No such file or directory usegalaxyorg , busco , usegalaxy-ca	4	32	May 18, 2026
Can't make miRDeep2 Quantifier work troubleshooting , tool-help , rbc_mirdeep2 , rbc_mirdeep2_mapper , rbc_mirdeep2_quantifier	3	19	February 20, 2026
Deepvariant analysis failed to complete: How to confirm reference genome choices tool-help , deepvariant	2	25	February 20, 2026
Genome update sus scro: how to use a custom genome! reference-index , custom-genome , troubleshooting , reference-annotation , reference-genome , custom-build	2	28	February 19, 2026
This job was terminated because it used more memory than it was allocated. How to troubleshoot! troubleshooting , exceeds-memory-error	1	21	February 17, 2026
ChIP sequencing troubleshooting , transcriptomics , usinggalaxy	1	19	February 16, 2026
GSE accession upload creates grey datasets with 0 pairs on usegalaxy.org upload , ena_upload , ebi_sra_main	1	16	February 16, 2026
Account Activation account	2	148	April 8, 2026
BWA-MEM2 input file naming custom-genome , igv , tool-help , bwa_mem2	2	26	February 13, 2026
“Input Data Is Missing” Error When Retrieving Dataset upload , usinggalaxy , fasterq_dump , fastq_dump	4	33	March 17, 2026
HISAT2 Tool Failing: Guidance for known issue at UseGalaxy.org Feb 9 2026. README server-open-issue , hisat2	2	39	February 10, 2026
Deeptrio Tool Support? How to request or contribute to Tool Development development-tools , resources	1	20	February 9, 2026
Protected data and public UseGalaxy servers upload	2	33	February 8, 2026
Encountered an unhandled exception while caching job destination dynamic rule server-side-error , server-status	2	32	February 6, 2026
IT fails to start tool-help	2	33	February 4, 2026
DeepVariant error troubleshooting , variant-analysis	3	40	February 3, 2026
Sorting FASTQ pairs by length	1	27	February 3, 2026
Splittng Paired End Sequences and MultiQC of Paired Sequences multiqc , fastq-splitter , collections , collection-shape	5	64	April 30, 2026
Use GTDB-Tk database: Navigating tool versions tool-version , reference-index , troubleshooting , resources	1	51	January 30, 2026
SnpEff eff (version 5.2) troubleshooting , tool-help , snpeff	7	83	January 28, 2026
MiModD Read Alignment troubleshooting	6	56	January 26, 2026