usegalaxy.org support

Topic	Replies	Views	Activity
Need help using the qiime2 tools import function qiime2 , qiime2_core__tools__import	2	35	February 25, 2026
Unable to import my files as .qza qiime2_core__tools__import	4	116	February 25, 2026
the metadata and error of qiime2 import qiime2 , qiime2_core__tools__import	4	106	February 25, 2026
BUSCO + miniprot fails with No such file or directory usegalaxyorg , busco , usegalaxy-ca	3	22	February 24, 2026
Can't make miRDeep2 Quantifier work troubleshooting , tool-help , rbc_mirdeep2 , rbc_mirdeep2_mapper , rbc_mirdeep2_quantifier	3	13	February 20, 2026
Deepvariant analysis failed to complete: How to confirm reference genome choices tool-help , deepvariant	2	20	February 20, 2026
Genome update sus scro: how to use a custom genome! reference-index , custom-genome , troubleshooting , reference-annotation , reference-genome , custom-build	2	19	February 19, 2026
This job was terminated because it used more memory than it was allocated. How to troubleshoot! troubleshooting , exceeds-memory-error	1	14	February 17, 2026
ChIP sequencing troubleshooting , transcriptomics , usinggalaxy	1	16	February 16, 2026
GSE accession upload creates grey datasets with 0 pairs on usegalaxy.org upload , ena_upload , ebi_sra_main	1	12	February 16, 2026
Account Activation account	2	88	April 8, 2026
BWA-MEM2 input file naming custom-genome , igv , tool-help , bwa_mem2	2	21	February 13, 2026
“Input Data Is Missing” Error When Retrieving Dataset upload , usinggalaxy , fasterq_dump , fastq_dump	4	22	March 17, 2026
HISAT2 Tool Failing: Guidance for known issue at UseGalaxy.org Feb 9 2026. README server-open-issue , hisat2	2	34	February 10, 2026
Deeptrio Tool Support? How to request or contribute to Tool Development development-tools , resources	1	14	February 9, 2026
Protected data and public UseGalaxy servers upload	2	26	February 8, 2026
Encountered an unhandled exception while caching job destination dynamic rule server-side-error , server-status	2	30	February 6, 2026
IT fails to start tool-help	2	26	February 4, 2026
DeepVariant error troubleshooting , variant-analysis	3	34	February 3, 2026
Sorting FASTQ pairs by length	1	23	February 3, 2026
Splittng Paired End Sequences and MultiQC of Paired Sequences multiqc , fastq-splitter , collections , collection-shape	5	52	April 30, 2026
Use GTDB-Tk database: Navigating tool versions tool-version , reference-index , troubleshooting , resources	1	41	January 30, 2026
SnpEff eff (version 5.2) troubleshooting , tool-help , snpeff	7	64	January 28, 2026
MiModD Read Alignment troubleshooting	6	48	January 26, 2026
MACS2 callpeak using pooled treatment on data collection troubleshooting	1	36	January 23, 2026
Bedgraph to bigwig problem troubleshooting	7	47	January 21, 2026
Undoing a deletion troubleshooting	5	28	January 21, 2026
How to export History to file while keeping original sample names workflow-options	1	37	January 20, 2026
SnpEff4.3 in public Galaxy troubleshooting	1	26	January 19, 2026
Empty annotated transcript file	1	17	January 13, 2026