Galaxy Community Help

Topic	Replies	Views	Activity
Scanpy FindVariableGenes tool-help , scanpy_find_variable_genes	1	49	July 11, 2025
BiG-SCAPE issue usegalaxy.eu support tool-help , bigscape	1	41	July 11, 2025
NanoFilt Tool - Galaxy usegalaxy.eu support single-cell , quality-control , nanoplot	3	118	July 11, 2025
Error in generating bigwig file after running macs2 usegalaxy.org support macs2	4	80	July 11, 2025
FASTA Filter tool error	9	135	July 11, 2025
From Blast to Tree usegalaxy.org support troubleshooting	1	50	July 10, 2025
Help with instructions for running Galaxy in our Institute's cluster devops-administration , galaxy-local , devops	1	52	July 10, 2025
Analysis of two identical biological paired-end bulk-RNA samples to derive highly expressed TFs usegalaxy.eu support gtn-tutorial	1	66	July 10, 2025
Remove save tags for history and workflow annotation usegalaxy.eu support workflow , feature-request	1	60	July 10, 2025
Locale error when running tools usegalaxy.org support troubleshooting , tool-help	5	121	July 10, 2025
Understanding BLASTX Tabular Output Against Swiss-Prot (25 Columns) genome-annotation	3	177	July 9, 2025
Galaxy for Humanities/Social Sciences	11	499	July 9, 2025
Requesting multithreading/CPU support devops-administration , galaxy-local	3	103	July 9, 2025
Cut and run: MACS2 error Resources macs2 , epigenetics , resources , tool-help	6	93	July 9, 2025
Apollo Create or Update Organism error usegalaxy.eu support tool-help , apollo	4	120	July 8, 2025
CPT Phage Structural Workflow fails at step 25 and I can't access apollo usegalaxy.eu support	3	77	July 8, 2025
structural workflow fails usegalaxy.org support genome-annotation	2	60	July 8, 2025
Apollo Create Organism Naming Conflict Error usegalaxy.eu support tool-help , apollo	1	29	July 8, 2025
The workflow for analysing whole genome sequencing data is showing errors at multiple steps upload , troubleshooting	1	62	July 7, 2025
Predict variant effects with VEP bug report usegalaxy.eu support	2	90	July 7, 2025
SnpEff errors while trying to run the tool usegalaxy.org support vcf-filter , snpeff	3	1314	March 30, 2020
FastQ ASCII table for raw sequences' QC usegalaxy.org support fastqc , fastq-format	2	196	July 4, 2025
Help for Compute tool syntax tool-help , add_a_column1	9	106	July 3, 2025
DeepARG reference data usegalaxy.eu support deeparg_predict	4	75	July 3, 2025
How to perform spike-in normalization for CUT&RUN usegalaxy.org support	0	216	July 3, 2025
Duration for running Pavian in Galaxy usegalaxy.eu support tool-help , interactive_tool_pavian	4	112	July 2, 2025
Uploading to usegalaxy.org upload	8	108	July 2, 2025
Fastq file google drive to galaxy gtn-tutorial , third-party-identities	3	803	July 2, 2025
How to download the inbuilt reference genome reference-genome	1	28	July 2, 2025
Uploading large file problem usegalaxy.eu support upload , development-tools	4	163	July 2, 2025