Galaxy Community Help

Topic	Replies	Views	Activity
ParaView not working interactive-tools	5	71	August 6, 2025
NCBI FCS GX fails (but used to run) usegalaxy.org support server-open-issue , ncbi_fcs_gx	4	143	August 6, 2025
HISAT2 error for paired sample usegalaxy.eu support	1	36	August 6, 2025
Making a new reference genome usegalaxy.org support	3	86	August 5, 2025
Filter sequences by ID in the tutorial Understanding Barcodes is not work troubleshooting	1	26	August 5, 2025
PyCaret Model Comparison usegalaxy.org support troubleshooting	1	22	August 5, 2025
Current issue in running my sequencing files usegalaxy.org support troubleshooting	1	38	August 5, 2025
Tsv file upload fail for maaslin2 usegalaxy.eu support upload , text-manipulation , troubleshooting	1	34	August 5, 2025
Lost account? Confirm the correct server URL in your original account activation email! account	3	116	August 5, 2025
Help Needed: coverM Tool Fails with "mkdir: cannot create directory ‘single/’: File exists" Error usegalaxy.eu support troubleshooting , coverm_genome , coverm_contig	1	47	August 5, 2025
Shovill, several day run/queue for some run usegalaxy.eu support queued-gray-datasets	1	49	August 5, 2025
Problem with STARsolo chimeric alignments output as separate tabular junctions in Galaxy Resources workflow , transcriptomics , tool-help , single-cell , rna_starsolo	1	43	August 5, 2025
How to construct input dict when running a tool in Galaxy externally through API? Resources tool-help	1	45	August 5, 2025
Alleyoop - unable to select dataset collections for bam, tsv, and vcf files collections , browse-upload-files	3	50	August 5, 2025
Getting information from database usegalaxy.eu support troubleshooting	1	38	August 5, 2025
Newly launched BN rat genome assembly GRCr8 into the reference genome list? usegalaxy.eu support reference-index , custom-genome , reference-annotation , reference-genome	1	50	August 5, 2025
Asking about qiime2 tools import Resources tool-help , qiime2_core__tools__import	1	102	August 5, 2025
Funanotate missing depencies usegalaxy.eu support	3	76	August 5, 2025
insight using Paraview interactive tool usegalaxy.eu support tool-help	4	96	August 5, 2025
Goseq tool not working usegalaxy.org support goseq	1	45	August 5, 2025
Goseq Overlapping names of GO terms rstudio , goseq	1	64	August 5, 2025
Install failure, how to restart / recover / retry ssl3_read_bytes "bad record mac" error devops-administration , galaxy-local	1	64	August 5, 2025
HiCUP Runtime and Tool Recommendations for Hi-C Analysis usegalaxy.eu support workflow , queued-gray-datasets , iwc-workflows	1	45	August 5, 2025
BRAKER3：There is an error with this dataset. usegalaxy.eu support	1	52	August 4, 2025
SLURM job resource requests ignored (CPU/memory/time) on Galaxy + Azure CycleCloud setup devops-administration , job-config , galaxy-local	1	49	August 4, 2025
assembly with flye	1	46	August 4, 2025
ATAC Seq wig to bigwig transformation of MACS2 data Resources workflow , tool-help	8	169	August 4, 2025
kMetaShot install Resources devops-administration , development-tools , tool-help	1	46	August 4, 2025
Queue pauses as soon as starting RNA star tool and won't resume usegalaxy.org support	9	108	August 4, 2025
NanoGalaxy not responding – stuck uploads and no job execution usegalaxy.eu support upload , server-status	4	72	August 3, 2025