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FROGS analysis and Phyloseq
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2
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213
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August 29, 2025
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MITOS2 error can't run job
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3
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69
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August 29, 2025
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Panaroo error - missing dependancies?
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7
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97
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August 28, 2025
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Convert GTF to BED12
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1
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56
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August 28, 2025
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Running MiRDeep2 with pooled reads from MiRDeep2 Mapper
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4
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76
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August 28, 2025
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Maker genome annotation pipeline (Galaxy Version 2.31.11+galaxy2) running for weeks
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5
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63
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August 28, 2025
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Is Galaxy Server down?
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3
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76
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August 28, 2025
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"Galaxy could not be reached" UseGalaxy.org August 28 2025 service restored
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1
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66
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August 28, 2025
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DADA2 Merge Pairs troubleshooting
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1
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56
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August 27, 2025
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Missing tools from the ASAIM MT workflow
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1
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22
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August 26, 2025
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Usegalaxy France - Compress Files does not work
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5
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64
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August 26, 2025
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iPHoP job running for 6+ days on Galaxy Europe (880 genomes)
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3
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58
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August 26, 2025
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Random empty output files
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8
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100
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March 17, 2026
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ATAC-Seq Analysis Using MACS2 Callpeak
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3
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332
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August 25, 2025
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Blast issue when trying to add species name: Fetch Taxonomic Ranks
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4
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97
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August 25, 2025
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Asking for unmapped genes in RNA sequencing via Galaxy
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1
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30
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August 25, 2025
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Implement/enable "Manage Your Remote File Sources" on local version of galaxy
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3
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47
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August 24, 2025
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MaAsLin2 job fails due to glmmTMB / TMB version mismatch
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2
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30
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August 21, 2025
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Flye giving error with bacterial genome
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1
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48
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August 21, 2025
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Eukaryote (Fasciola gigantica) assembly
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1
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34
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August 20, 2025
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Cannot connect to usegalaxy.eu using Firefox
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1
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28
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August 19, 2025
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Help with RNA Star, Featurecounts, and reference annotation choices
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1
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150
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August 19, 2025
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GTN Transcriptomics Hands-on: Genome-wide alternative splicing analysis. Troubleshooting reference data choices!
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27
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334
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August 19, 2025
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Planemo, docker, python: issue with getting args passed to the script
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6
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73
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March 17, 2026
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Free energy landsape using Bio3d in galaxy
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5
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116
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August 18, 2025
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Writing proper tests for a dynamic collection created through the discover_datasets tag
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1
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26
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August 18, 2025
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Using Arriba for Fusion detection on Galaxy
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3
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48
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August 15, 2025
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SLURM job resource requests ignored (CPU/memory/time) on Galaxy + Azure CycleCloud setup
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7
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122
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March 17, 2026
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Question about UMI-tools extract: different version from the tutorial?
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3
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86
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August 13, 2025
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msConvert can't proceed due to wine64: command not found
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7
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80
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August 13, 2025
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