Galaxy Community Help

Topic	Replies	Views	Activity
limitGenomeGenerateRAM issue of RNA-STAR in my local galaxy galaxy-local , troubleshooting	1	8	March 21, 2025
Split R1/R2 from output usegalaxy.org support fastq_manipulation	1	5	March 21, 2025
Integrating Day 0 Controls in a CRISPR Screen Analysis with Mageck: Seeking Advice single-cell	1	11	March 21, 2025
Setup for Annovar server-admin , galaxy-local , tool-deprecated	4	18	March 21, 2025
planemo test/serve conda package installation planemo	1	12	March 21, 2025
Change the default language of Galaxy server-admin , galaxy-local	3	13	March 20, 2025
the galaxy europe server is slow, jobs stuck troubleshooting	1	226	April 3, 2024
Allocation of server for teaching a class since the speed is low usegalaxy.org support troubleshooting , training	10	21	March 18, 2025
Bugs in Galaxy 24.2.3 galaxy-local , release	5	19	March 18, 2025
BAM file from HISAT2 to fastq for Genome assembly usegalaxy.eu support bedtools , fastq-format	3	14	March 18, 2025
Generating MD Topology (ACPYPE) usegalaxy.eu support proteomics	5	12	March 17, 2025
Error on Apollo for the Create or Update Organism tool	2	4	March 17, 2025
CSS Changes Not Reflecting in Galaxy Interface - Local Development Issue tool-dev , galaxy-local	4	25	March 17, 2025
Apollo help for Create or Update Organism account , tool-help , apollo	1	4	March 17, 2025
Making contigs "this job is waiting to run" usegalaxy.org support queued-gray-datasets	1	10	March 17, 2025
Troubleshooting: Krona Pie chart display usegalaxy.org support metagenomics	6	24	March 17, 2025
Can i restrict tools to a group of users? server-admin , galaxy-local	1	5	March 17, 2025
I attempted to run LOTUS2 on the Galaxy server multiple times, but the job failed usegalaxy.org support server-admin , gtn-tutorial , metagenomics	1	7	March 17, 2025
Gemini database installation crash server-admin , galaxy-local , troubleshooting , server-open-issue	6	15	March 17, 2025
galaxy training - Calling variants in diploid systems gemini annotation source unavailable usegalaxy.be support gemini , tool-help , variant-analysis	8	33	March 15, 2025
Request to update BLASTP nr database usegalaxy.eu support reference-index , blastp	5	15	March 14, 2025
Missing gene id labeling in limma usegalaxy.org.au support limma_voom	16	35	March 14, 2025
Setting up a galaxy instance - admin issues	1	12	March 14, 2025
Getting NCBI Reference genome indexed for tools: custom genome, reference genome, reference annotation reference-index , custom-genome , reference-annotation , reference-genome , featurecounts , reference-transcriptome	10	40	March 14, 2025
Two Unipept tools - which one to use? usegalaxy.eu support tool-panel	1	6	March 14, 2025
Case-sensitive Select tool? usegalaxy.eu support text-manipulation , tool-help , grep1 , select	3	7	March 13, 2025
is possible to disable web interface of galaxy? galaxy-local	2	16	March 13, 2025
galaxy bioinformatics API KEY expires? api , user-preferences	4	14	March 13, 2025
Snpeff database run errors usegalaxy.org support tool-help , snpeff , snpeff_build_gb	3	12	March 13, 2025
Introductory Tutorial Genomics & Galaxy: Error on Overlapping Intervals usegalaxy.org support gtn-tutorial , troubleshooting	3	6	March 13, 2025