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Tutorials, tools, and custom reference genomes
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1
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332
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June 6, 2023
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Snippy to find SNP in bacterial DNA seq
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6
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492
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June 5, 2023
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Mapping reads to references by PEAR, bowtie2, samtool idx and sort tools
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4
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322
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June 2, 2023
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gemını inheritance pattern
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1
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349
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May 24, 2023
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problem with bcftools isec
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3
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407
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May 2, 2023
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Convert VCF to pg_snp and gd_snp
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5
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495
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April 13, 2023
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Ways to make a variant calling for RNA Seq (paired-end)
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5
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532
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April 12, 2023
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SnpEff eff: annotate variants is producing errors
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2
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259
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April 1, 2023
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problems with vcftools merge command
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1
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339
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March 29, 2023
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Variant Analysis/ JBrowse
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1
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275
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March 15, 2023
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Errors urgent in variant filtering and insertsize
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2
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393
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March 10, 2023
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VarScan error: index file older than data file and fail to parse certain regions
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2
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706
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February 24, 2023
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Eukaryote VCF annotation
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5
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254
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February 10, 2023
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Error while Intersecting VCF files
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3
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305
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February 4, 2023
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How to use SNPsplit in galaxy on mouse genome bam files to allign to two different mouse strains or is there anyother alternative...i need the output in .bam format
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3
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272
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January 31, 2023
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Local Galaxy CVMFS - BWA/BWA-MEM fails to locate the index files
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5
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812
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January 30, 2023
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Genom not found in SnpEff annotation
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2
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289
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January 13, 2023
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Filtering SnpEff output with SnpSift
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2
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829
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January 4, 2023
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DGE counts of zero on Limma voom
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8
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509
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December 15, 2022
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Is gubbins not working?
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3
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574
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December 6, 2022
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gemini database download error
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3
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345
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November 28, 2022
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snippy fails when running a list of dataset pairs
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3
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446
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November 25, 2022
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Genome file missing in SNP calling session "From NCBI's Sequence Read Archive (SRA) to Galaxy: SARS-CoV-2 variant analysis"
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1
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242
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October 31, 2022
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Snippy tool bug?
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6
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489
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December 22, 2023
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Job fail in one element of the list stops the whole pipelin
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1
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502
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September 22, 2022
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FATAL: [0m Couldn't determine user account information: user: unknown userid -- Resolved at UseGalaxy.org 08/31/2022
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12
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1140
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September 12, 2022
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Gubbins is not work
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3
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363
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September 17, 2022
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Gemini query empty.
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2
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433
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June 30, 2022
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How to combine 2 VCF files in a Workflow...
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11
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2808
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August 1, 2020
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merge multiple VCF files - variant analysis and sample organization
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5
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6652
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January 29, 2020
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