|
CNV detection from BAM files (mouse)
|
|
1
|
117
|
July 9, 2024
|
|
Will Nanopore-related tools be updated to accept pod5 files?
|
|
2
|
188
|
July 8, 2024
|
|
Is Gatk/4.4.0.0 avialble in galaxy?
|
|
1
|
167
|
May 28, 2024
|
|
FreeBayes variant calling and Snpeff variant annotation
|
|
19
|
463
|
September 17, 2024
|
|
bcftools view problem
|
|
2
|
123
|
May 20, 2024
|
|
Identifying polymorphisms in mapped RNA seq data and the corresponding genes
|
|
1
|
73
|
May 10, 2024
|
|
FTDNA BAM to T2T pileup and haplogroup
|
|
2
|
212
|
May 7, 2024
|
|
Gemini Load error in variant calling
|
|
1
|
105
|
May 6, 2024
|
|
Extract fields from sample-specific/genotype columns of a VCF with SnpSift Extract Fields
|
|
3
|
228
|
May 6, 2024
|
|
FreeBayes regd.
|
|
1
|
140
|
March 25, 2024
|
|
Regarding SNP eff
|
|
2
|
170
|
January 17, 2024
|
|
Help with vcf annotation
|
|
2
|
301
|
January 10, 2024
|
|
To know about the polymorphism at a given locus
|
|
1
|
208
|
January 10, 2024
|
|
Snippy results in no variants (my data and microbial variant tutorial)
|
|
1
|
601
|
December 22, 2023
|
|
Synonymous SNPs/mutations
|
|
1
|
417
|
December 22, 2023
|
|
Merging snippy core output
|
|
1
|
373
|
December 22, 2023
|
|
variant calling by Freebyes
|
|
1
|
693
|
December 22, 2023
|
|
SnpSift Annotate
|
|
1
|
454
|
December 21, 2023
|
|
Fixing Errors in Bam Files
|
|
1
|
478
|
December 21, 2023
|
|
error: more sample fields than samples listed in header samples
|
|
1
|
627
|
December 21, 2023
|
|
SnpEff Chromosome Not Found Error
|
|
1
|
536
|
December 21, 2023
|
|
Error Messages in bcftools
|
|
1
|
399
|
December 21, 2023
|
|
Assistance with Variant Analysis
|
|
6
|
341
|
November 21, 2023
|
|
I can't find SNP Primer Design Module
|
|
3
|
304
|
November 2, 2023
|
|
Please avail the admixture software in GALAXY
|
|
1
|
265
|
October 30, 2023
|
|
How to use the tool--SNP Primer Design?
|
|
3
|
491
|
October 18, 2023
|
|
How can I split a VCF file by chromosome?
|
|
2
|
2669
|
September 14, 2023
|
|
Gubbins failed to giveresults on various galaxy links
|
|
1
|
229
|
August 31, 2023
|
|
A tool in the platform that performs allele frequency calculation on a set of samples?
|
|
1
|
320
|
August 29, 2023
|
|
About INS annoation (snpEff)
|
|
0
|
212
|
August 10, 2023
|