How to obtain FASTA sequence after mapping RNA-Seq file
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1
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64
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August 29, 2024
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Problems Bowtie2 or Htseqcount
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1
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38
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August 27, 2024
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How can i get RPKM for Single end data?
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1
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24
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August 24, 2024
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Conversion from scRNA-seq files to bam files
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1
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20
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August 24, 2024
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List with zero data sets in Limma voom
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10
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62
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August 18, 2024
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Help with TPM values
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2
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64
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August 15, 2024
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About DESeq2 Errors
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2
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33
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September 17, 2024
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Genome index STAR
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1
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27
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August 13, 2024
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Genome wide alternate splicing analysis - IsoformSwitchAnalyzeR error from StringTie input - no CDS
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9
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87
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August 7, 2024
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Ajusting batches from different experiments in DESeq2 analysis
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1
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3
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August 6, 2024
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Calculating FPKM or RPKM directly from Counts
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1
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59
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July 29, 2024
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DESeq2 Analysis with tximport Output - Matrix Dimension Error
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4
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71
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July 26, 2024
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limma-voom multiple factors & groups
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5
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435
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July 25, 2024
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Interpreting Reference/Primary Factor Group for DeSeq2 results
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4
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45
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July 17, 2024
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Genomes in columns for limma-voom.
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1
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11
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July 15, 2024
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Funannotate fails, maybe trying to create a file
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3
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107
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July 10, 2024
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multiple jobs stuck on queue in RNA STAR for almost 2 days
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3
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492
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July 8, 2024
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RNA STAR error in the log output file
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10
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66
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July 2, 2024
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DEseq2 with 3 factor levels only output one contrast group
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1
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69
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June 28, 2024
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Require Assistance with RNA-Seq Analysis Pipeline for Studying Differential Expression
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1
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161
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June 21, 2024
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RNA alignment not detecting indels
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5
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94
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June 17, 2024
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"`CXXABI_1.3.13' not found" when running Salmon
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1
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122
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June 14, 2024
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Deseq2 fatal error: cannot match any column
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4
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79
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June 14, 2024
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Error in reference genome file format - STRINGTIE
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1
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143
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May 28, 2024
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RNA STARSolo parameters for 10x 5' data
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5
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145
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May 23, 2024
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Error while performing DenovoRNAseq.
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2
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77
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May 16, 2024
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StringTie error generating gene and transcripts counts files
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2
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292
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May 14, 2024
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Is there a tool that generates FPKM counts of genes automatically?
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2
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264
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February 14, 2025
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Identifying polymorphisms in mapped RNA seq data and the corresponding genes
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1
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71
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May 10, 2024
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Issue with StringTie Output File when using DESeq2 option
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4
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465
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May 8, 2024
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