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Problem with custom tool outputs, refusing to overwrite?
|
|
4
|
890
|
April 12, 2019
|
|
Fastq to BAM file
|
|
3
|
993
|
December 21, 2023
|
|
Built-in genome index update for felis catus
|
|
2
|
644
|
August 22, 2019
|
|
How to do refSeq to Gene Symbol Converter?
|
|
2
|
1141
|
May 25, 2019
|
|
Display in UCSC is not showing in my local instance of Galaxy
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|
3
|
554
|
March 13, 2019
|
|
Regex Problem using Import tool on QIIME2 for Galaxy
|
|
4
|
879
|
April 12, 2023
|
|
staramr tool failure
|
|
5
|
802
|
October 19, 2021
|
|
Data paused and keep getting error: Tophat RNA data -- Tophat/Tophat2 Deprecated, use HISAT2
|
|
1
|
777
|
May 8, 2020
|
|
Variant calling from VCF files
|
|
4
|
873
|
March 17, 2026
|
|
How to merge multiple fastq files into one? How do trim low-quality sequences based on Qscore of Nanopore data?
|
|
2
|
1126
|
June 13, 2023
|
|
Error in Join two datasets in Galaxy Docker 20.05
|
|
5
|
796
|
July 23, 2022
|
|
$output.files_path points to wrong directory is there a fix?
|
|
3
|
973
|
December 10, 2021
|
|
Unable to view bams via igb nor igv
|
|
3
|
972
|
December 21, 2023
|
|
Galaxy 19.01 apache proxy problem (each action leads to the welcome page)
|
|
2
|
630
|
June 12, 2019
|
|
DESeq2 output error
|
|
1
|
1368
|
March 30, 2021
|
|
FastQC reports from list of pairs PE Illumina reads all have sample name "forward" or "reverse"
|
|
5
|
788
|
May 28, 2021
|
|
Trinity is running since from one week for 20GB file??? is it ok???
|
|
2
|
625
|
February 10, 2023
|
|
Galaxy tool, select different functions
|
|
8
|
640
|
March 3, 2022
|
|
How/ where can I download Annotation exac03(hg19) database and import it to Galaxy?
|
|
2
|
1104
|
December 21, 2023
|
|
Comparing two contig assemblies- LASTZ failure
|
|
5
|
780
|
December 13, 2020
|
|
Unable to reset password
|
|
0
|
339
|
March 5, 2021
|
|
Cannot open zipped file -- Solution: load individual datasets, not multi-file archives
|
|
1
|
757
|
February 24, 2022
|
|
Batch concatenate reads
|
|
4
|
850
|
April 21, 2021
|
|
Cloudlaunch active appliances
|
|
2
|
617
|
March 17, 2026
|
|
PICRUSt : Error message when "Normalize By Copy Number"
|
|
4
|
847
|
January 16, 2025
|
|
Featurecounts in built genome giving no read assignments
|
|
3
|
532
|
February 16, 2023
|
|
FRiP score chip-seq
|
|
2
|
1092
|
April 4, 2022
|
|
FeatureCounts – What are the implications of counting paired-end reads individually or as fragments?
|
|
2
|
1092
|
February 14, 2025
|
|
Uncaught exception in exposed API method:
|
|
7
|
667
|
March 17, 2026
|
|
Error in microarray meta-analysis - Input problems
|
|
1
|
750
|
June 20, 2019
|
|
Local Galaxy GIEs: get in jupyterlab throws error
|
|
4
|
473
|
December 21, 2023
|
|
Issue Selecting Column in "Group" Function
|
|
2
|
610
|
April 27, 2020
|
|
the Tool "initial processing with RacelD" do not work!
|
|
1
|
420
|
March 22, 2021
|
|
diffbind update
|
|
5
|
766
|
December 21, 2023
|
|
Galaxy job handler not processing jobs
|
|
4
|
839
|
December 22, 2023
|
|
Coursera Genomic Data Science
|
|
1
|
745
|
July 10, 2020
|
|
Infinitely spawning ghost jobs (JobHandlerQueue.monitor_thread)
|
|
2
|
608
|
March 3, 2021
|
|
TRINITY - Remote job server indicated a problem running or monitoring this job.
|
|
2
|
607
|
April 8, 2020
|
|
planemo shed_update fails with "exceeds the server's configured size limit"
|
|
6
|
706
|
May 17, 2023
|
|
qiime2 tools import
|
|
8
|
622
|
February 25, 2026
|
|
Learning NGS data analysis and building pipelines
|
|
1
|
417
|
May 19, 2021
|
|
List of all datatypes?
|
|
1
|
417
|
April 19, 2021
|
|
Password 'permission denied' fails using sftp - on Sun Grid Engine: resolved
|
|
1
|
1314
|
December 19, 2023
|
|
problem of not installing dependencies in galaxy 19.05
|
|
3
|
928
|
December 8, 2019
|
|
Galaxy installation failed
|
|
6
|
699
|
March 17, 2026
|
|
Problem running vault password script
|
|
5
|
755
|
March 17, 2026
|
|
Converting GFF3 to GTF
|
|
3
|
923
|
January 31, 2023
|
|
How to input a single paired-paired in data file into Trimmomatic? How to split forward and reverse reads of different length?
|
|
1
|
1300
|
April 4, 2020
|
|
Picard indexer (Fatal error: Exit code 1)
|
|
2
|
1060
|
November 28, 2019
|
|
Trim long header and make it shorter
|
|
2
|
596
|
June 16, 2023
|